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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55234002_55234292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55234002 - 55234292

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TACTGTCTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGTATCTTACTG

Flanking Amino Acid:

NKVKSRKPPSRIKPKSGKKT

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

0.41

1.1

67.8

37.7

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

53.9

-0

1.7

60.2

42.1

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792