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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55234443_55237027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

55234443 - 55237027

Intron Length:

2585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGATAT

5'SS Class:

major

3'SS Sequence:

TTTGATTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTCTTTTGATT

Flanking Amino Acid:

SSETKKKKHKDEDWQMSGSG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

71.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

86.1

0.81

0.8

80.1

37.1

Minor 5ss

40.9

-1

3.1

52.9

44.9

Minor BPS

63.4

0.5

1.2

75.19

36.2

Associated Gene:

Gene:

CHD1

Ensembl Gene ID:

ENSAPLG00000009965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010493

55204845 - 55239642

34798

ENSAPLT00000005371

55204845 - 55239636

34792