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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5528422_5538658_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5528422 - 5538658

Intron Length:

10237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTTCGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAACT

Flanking Amino Acid:

GNDAEVRVLSDPGLHRQQFF

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

80.6

0.69

0.8

31.6

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

88.9

1.3

0.8

99.22

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278