Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_55389280_55391010_F

Intron Information:

Intron Rank:

136876

Intron Class:

major

Intron Phase:

Intron Coordinates:

55389280 - 55391010

Intron Length:

1731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGAATC

5'SS Class:

major

3'SS Sequence:

AGAATCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTATTTTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

71.6

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

70.1

0.45

61.7

43.7

Minor 5ss

39.5

-1.2

2.9

52.3

44.5

Minor BPS

63.2

0.5

1.8

83.36

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031343

55388787 - 55391578

2792