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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5538944_5571143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5538944 - 5571143

Intron Length:

32200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

AGCTATCTAACT

Flanking Amino Acid:

ISRTAKVMVAGPLRFLSQTE

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

82.4

0.73

0.9

76.3

37.7

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

49.9

0.08

1.9

68.92

41.6

Associated Gene:

Gene:

DCC

Ensembl Gene ID:

ENSAPLG00000009368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044019

5323903 - 5571574

247672

ENSAPLT00000009845

5323903 - 5600180

276278