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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56354553_56356503_F

Intron Information:

Intron Rank:

133310

Intron Class:

major

Intron Phase:

Intron Coordinates:

56354553 - 56356503

Intron Length:

1951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

AAAATGTGAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

72.9

31.2

Major BPS

65.7

0.39

71.3

30.3

Major PPT

85.6

0.8

80.6

31.4

Minor 5ss

28.5

-2.5

2.8

31.7

36.2

Minor BPS

40.3

-0.7

45.93

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038593

56343502 - 56356916

13415