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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56424205_56425370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56424205 - 56425370

Intron Length:

1166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

GTTCTTTGCATT

Flanking Amino Acid:

ERMAYLLMGISAACKIITII

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

79.9

0.67

0.9

77.7

35.8

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

46.4

-0.2

1.8

66.29

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009739

56423962 - 56454992

31031