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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56426696_56428639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56426696 - 56428639

Intron Length:

1944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTGTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TCTGTATTAAAT

Flanking Amino Acid:

AVTPTTVAILRCVPDKQRSF

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

82.4

0.73

0.9

37.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

54.7

0.23

1.8

73.71

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009739

56423962 - 56454992

31031