Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56428828_56430650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56428828 - 56430650

Intron Length:

1823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTTAT

5'SS Class:

major

3'SS Sequence:

AAATTATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTTGTTTTACA

Flanking Amino Acid:

TSSLLTNMKKAYYNCSCIGK

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

34.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

69.8

0.45

62.9

42.3

Minor 5ss

40.9

-1

3.1

58.4

46.1

Minor BPS

61.2

0.34

2.1

78.96

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009739

56423962 - 56454992

31031