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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56439892_56442815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56439892 - 56442815

Intron Length:

2924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

GTATGGTAAAGT

Flanking Amino Acid:

VPKHKSSLYIGIGYAMSLLG

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

70.3

0.46

0.7

62.4

28.7

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

39.5

-0.7

2.7

60.91

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009739

56423962 - 56454992

31031