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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56443011_56449215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56443011 - 56449215

Intron Length:

6205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTTTCTGTCATT

Flanking Amino Acid:

GKYQFGAKREDTCQISGTSS

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.7

0.67

0.9

77.6

35.8

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

49.1

0.01

2.4

75.88

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009739

56423962 - 56454992

31031