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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56627855_56629239_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56627855 - 56629239

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGTGC

5'SS Class:

weak_major

3'SS Sequence:

TTCCTTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTATTTAATG

Flanking Amino Acid:

RNAPPTRLPKGVGFRVGGET

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.2

57.4

42.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.63

0.7

77.4

24.6

Minor 5ss

48.7

-0.1

2.9

67.9

43.4

Minor BPS

71.8

0.55

1.5

76.08

35.8

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858