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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56629324_56637791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56629324 - 56637791

Intron Length:

8468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTAATTTGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTTTTGTAATT

Flanking Amino Acid:

VHYGDISAFRDKHKDCSGVT

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

70.9

0.47

1.1

64.8

45.4

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

59.2

0.37

79.54

37.3

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858