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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56638383_56640019_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56638383 - 56640019

Intron Length:

1637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CATATTTTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CATATTTTAACA

Flanking Amino Acid:

VNTVIPPGEKVVDADIACHY

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

74.2

0.54

69.4

40.1

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

65.5

0.48

1.3

68.51

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858