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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56640101_56640216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56640101 - 56640216

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTATATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TATCCCTGTACA

Flanking Amino Acid:

FAYRVHTHRLGKVVSGYRVR

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

76.3

0.59

69.3

40.3

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

57.6

0.23

1.8

71.47

39.9

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858