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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56640698_56646306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56640698 - 56646306

Intron Length:

5609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATCTT

5'SS Class:

major

3'SS Sequence:

CTGTATTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CCTCTTCTAACT

Flanking Amino Acid:

GEGRTTETHIGGTANDEMCN

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

75.1

41.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

69.7

0.44

64.7

41.1

Minor 5ss

39.1

-1.2

3.2

50.4

45.9

Minor BPS

52.5

0.16

1.7

69.07

42.2

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858