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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56646495_56647704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56646495 - 56647704

Intron Length:

1210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAAAAC

5'SS Class:

major

3'SS Sequence:

TTCGTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATATTCTAAATT

Flanking Amino Acid:

MLKMTHGHHEETKDTDKSSL

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

0.9

73.6

30.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

85.2

0.79

0.7

84.5

30.4

Minor 5ss

27.7

-2.6

2.9

33.7

41.9

Minor BPS

64.6

0.54

1.6

78.58

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858