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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56647774_56659805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56647774 - 56659805

Intron Length:

12032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTCCTCTTATCT

Flanking Amino Acid:

KGEEGEILDQGDFYSLLSKL

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.1

37.8

Major BPS

79.1

0.72

69.3

38.4

Major PPT

85.2

0.79

0.8

80.5

30.5

Minor 5ss

-0.6

2.5

52.7

Minor BPS

65.4

0.56

1.6

80.81

41.1

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858