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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56660112_56665199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56660112 - 56665199

Intron Length:

5088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

GTTTCTTTGGTC

Flanking Amino Acid:

EGSWDKEHTGDFHIEEAVEW

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

37.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

78.4

0.64

80.5

Minor 5ss

32.7

-2

3.1

39.1

46.7

Minor BPS

45.8

-0.3

3.4

69.72

36.4

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858