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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56673591_56674109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56673591 - 56674109

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTGTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

ATGTCTTTAACT

Flanking Amino Acid:

AKLLHSTGKSLFYLPHGLSI

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

74.7

0.61

65.9

40.9

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

83.4

1.13

90.18

33.9

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010027

56601152 - 56698009

96858

ENSAPLT00000028082

56601152 - 56685048

83897