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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56674183_56674752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56674183 - 56674752

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTGATTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATTGATTTAAAA

Flanking Amino Acid:

YWVTDVALHQVFKLGADAKE

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

60.5

0.24

1.2

43.1

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

55.7

0.18

1.7

67.93

38.2

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858