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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56674961_56675610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56674961 - 56675610

Intron Length:

650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAGCT

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TGTATTTTAACA

Flanking Amino Acid:

NGLYIMQWGEETSSGRPGQF

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.3

72.5

37.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

85.8

0.81

0.9

80.6

Minor 5ss

28.5

-2.5

3.2

40.2

45.4

Minor BPS

71.7

0.68

1.2

76.38

34.4

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858