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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56675806_56676799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56675806 - 56676799

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

AATATTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TGTTAAAGAAAA

Flanking Amino Acid:

RELFAVSYVPGGLLFAVNGM

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

73.3

0.52

66.1

44.3

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

41.9

-0.6

2.1

58.6

39.4

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858