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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56679525_56680878_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56679525 - 56680878

Intron Length:

1354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTGTCCTGAAGA

Flanking Amino Acid:

RTVWKFASTEKMEHRSVKKA

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

83.3

29.1

Major BPS

78.2

0.7

79.9

32.6

Major PPT

92.5

0.96

0.7

87.5

Minor 5ss

63.8

0.47

2.2

75.6

33.8

Minor BPS

65.5

0.48

1.8

76.23

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897

ENSAPLT00000010027

56601152 - 56698009

96858