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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56682847_56697965_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56682847 - 56697965

Intron Length:

15119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCATG

5'SS Class:

major

3'SS Sequence:

TCAGTTTTAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

AGCTCCTCAGTT

Flanking Amino Acid:

IRWRKTTVYGGDGRGGCLNA

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.2

72.7

44.5

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

51.5

0.04

1.7

62.2

Minor 5ss

48.5

-0.1

2.6

45.2

Minor BPS

51.3

0.12

1.8

67.57

43.4

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010027

56601152 - 56698009

96858