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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56684343_56684866_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56684343 - 56684866

Intron Length:

524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAC

U12 Branch Point Sequence:

TTCTTTTCCACA

Flanking Amino Acid:

NSSRVLGRLRGKGGGGLNLG

Intron Amino Acid Position:

910

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

74.7

0.62

1.1

65.7

Major PPT

87.3

0.84

0.6

83.5

24.9

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

49.3

-0

1.9

66.33

40.9

Associated Gene:

Gene:

PAM

Ensembl Gene ID:

ENSAPLG00000009549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028082

56601152 - 56685048

83897