Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56715231_56716488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56715231 - 56716488

Intron Length:

1258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTATGTACT

5'SS Class:

major

3'SS Sequence:

CCCCCCTCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTAAAATAATT

Flanking Amino Acid:

GEEEEEEYDSPPERQIAVGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

70.4

39.4

Major BPS

81.6

0.78

0.8

24.9

Major PPT

75.8

0.58

0.7

72.2

25.9

Minor 5ss

47.4

-0.3

2.5

70.9

38.8

Minor BPS

48.8

-0

76.5

39.4

Associated Gene:

Gene:

PPIP5K2

Ensembl Gene ID:

ENSAPLG00000010179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010640

56714832 - 56757465

42634

ENSAPLT00000038446

56714832 - 56757465

42634

ENSAPLT00000010637

56714832 - 56750912

36081

ENSAPLT00000022617

56714832 - 56757465

42634

ENSAPLT00000021806

56714832 - 56757465

42634

ENSAPLT00000018753

56714832 - 56757465

42634