Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56728883_56729768_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56728883 - 56729768

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATC

Flanking Amino Acid:

QKMKMEVKHQKFFDLFEKCD

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.8

0.56

75.2

27.5

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

75.8

0.79

1.1

78.23

31.1

Associated Gene:

Gene:

PPIP5K2

Ensembl Gene ID:

ENSAPLG00000010179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010640

56714832 - 56757465

42634

ENSAPLT00000038446

56714832 - 56757465

42634

ENSAPLT00000010637

56714832 - 56750912

36081

ENSAPLT00000022617

56714832 - 56757465

42634

ENSAPLT00000021806

56714832 - 56757465

42634

ENSAPLT00000018753

56714832 - 56757465

42634