Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56731172_56731842_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56731172 - 56731842

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTAGTAT

5'SS Class:

major

3'SS Sequence:

TGTGTACAATTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TGCTACTAAACT

Flanking Amino Acid:

GCPKTSSEEEDNRRNEPSLL

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

66.8

34.4

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

59.1

0.21

57.6

42.6

Minor 5ss

38.4

-1.3

3.4

54.5

49.7

Minor BPS

0.39

1.9

77.67

44.4

Associated Gene:

Gene:

PPIP5K2

Ensembl Gene ID:

ENSAPLG00000010179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010640

56714832 - 56757465

42634

ENSAPLT00000038446

56714832 - 56757465

42634

ENSAPLT00000010637

56714832 - 56750912

36081

ENSAPLT00000022617

56714832 - 56757465

42634

ENSAPLT00000021806

56714832 - 56757465

42634

ENSAPLT00000018753

56714832 - 56757465

42634