Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56741446_56742131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56741446 - 56742131

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

ATATTGTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TGAATCTAAATT

Flanking Amino Acid:

GYGYRPASRENEGSKKTSHR

Intron Amino Acid Position:

929

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

75.6

0.58

0.9

70.2

40.5

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

54.4

0.22

1.7

69.87

41.2

Associated Gene:

Gene:

PPIP5K2

Ensembl Gene ID:

ENSAPLG00000010179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010640

56714832 - 56757465

42634

ENSAPLT00000038446

56714832 - 56757465

42634

ENSAPLT00000010637

56714832 - 56750912

36081

ENSAPLT00000022617

56714832 - 56757465

42634

ENSAPLT00000021806

56714832 - 56757465

42634

ENSAPLT00000018753

56714832 - 56757465

42634