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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56763217_56770473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56763217 - 56770473

Intron Length:

7257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGC

5'SS Class:

major

3'SS Sequence:

GTTTCGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTTTCTGATAA

Flanking Amino Acid:

RQPRRRPGAQEGSAAFKMEV

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

65.2

40.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

79.8

0.67

0.8

77.4

36.9

Minor 5ss

29.4

-2.4

3.5

41.3

45.4

Minor BPS

50.1

1.8

66.23

39.7

Associated Gene:

Gene:

C5orf30

Ensembl Gene ID:

ENSAPLG00000029179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027077

56762551 - 56771758

9208