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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56861979_56864489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56861979 - 56864489

Intron Length:

2511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

GGTTATAATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CGTTCCTTACAA

Flanking Amino Acid:

LSSVKQISQKDLKSEMNKNR

Intron Amino Acid Position:

846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

63.7

0.31

60.3

44.8

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

60.4

0.32

1.8

69.33

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010867

56822941 - 56868085

45145