Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_56907447_56908099_F

Intron Information:

Intron Rank:

145682

Intron Class:

major

Intron Phase:

Intron Coordinates:

56907447 - 56908099

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGATTT

5'SS Class:

major

3'SS Sequence:

CTGTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AGTATTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

73.6

37.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

80.2

0.68

0.9

76.9

37.3

Minor 5ss

38.8

-1.3

3.4

56.5

47.8

Minor BPS

51.4

0.12

1.6

67.09

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048492

56907327 - 56915192

7866