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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5756511_5758902_F

Intron Information:

Intron Rank:

150715

Intron Class:

major

Intron Phase:

Intron Coordinates:

5756511 - 5758902

Intron Length:

2392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCCTG

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TTAAGCTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.6

48.1

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

85.8

0.81

0.8

83.6

31.4

Minor 5ss

-1

3.1

48.4

47.2

Minor BPS

47.1

-0.1

2.2

70.65

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028311

5755732 - 5759224

3493