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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5771766_5777227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5771766 - 5777227

Intron Length:

5462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

TTCCTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAA

U12 Branch Point Sequence:

CCTCGCTGAACT

Flanking Amino Acid:

EHVAEIVGRQGCKIKALRAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

54.6

0.12

1.1

46.7

38.9

Major PPT

74.6

0.55

0.8

70.1

29.4

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

51.6

0.13

70.08

46.5

Associated Gene:

Gene:

MEX3C

Ensembl Gene ID:

ENSAPLG00000003916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004002

5771047 - 5778441

7395