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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5786146_5786749_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5786146 - 5786749

Intron Length:

604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TTTCACCCAGCT

Flanking Amino Acid:

AFQPPISNHPAPEYWCSIAY

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

79.8

0.67

0.9

70.6

40.6

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

44.8

-0.3

2.2

72.36

43.5

Associated Gene:

Gene:

SMAD4

Ensembl Gene ID:

ENSAPLG00000003924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024917

5783221 - 5803822

20602

ENSAPLT00000004047

5783221 - 5803822

20602