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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5786801_5788229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5786801 - 5788229

Intron Length:

1429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

TTTCTCTTCAAG

Flanking Amino Acid:

HHPPMHPGHYWPVHNELAFQ

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

60.7

0.27

65.3

28.1

Major PPT

80.8

0.69

79.8

32.6

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

52.7

-0

65.72

41.9

Associated Gene:

Gene:

SMAD4

Ensembl Gene ID:

ENSAPLG00000003924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024917

5783221 - 5803822

20602

ENSAPLT00000004047

5783221 - 5803822

20602