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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5802659_5803573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5802659 - 5803573

Intron Length:

915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTAACTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TTGTGTCTAACT

Flanking Amino Acid:

IQRTLDGRLQVAGRKGFPHV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

1.1

81.8

31.1

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

76.6

0.6

0.8

73.7

36.4

Minor 5ss

32.4

-2

2.4

35.7

40.3

Minor BPS

56.4

0.28

2.1

80.2

Associated Gene:

Gene:

SMAD4

Ensembl Gene ID:

ENSAPLG00000003924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024917

5783221 - 5803822

20602

ENSAPLT00000004047

5783221 - 5803822

20602