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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5820989_5821399_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5820989 - 5821399

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CACCCATCAAAT

Flanking Amino Acid:

SQYGHIFRRPKGLFISISDR

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

74.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

41.4

-1

2.8

50.4

39.9

Minor BPS

44.8

-0.3

1.9

57.83

Associated Gene:

Gene:

ME2

Ensembl Gene ID:

ENSAPLG00000004164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004303

5815751 - 5829093

13343