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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5834500_5834787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5834500 - 5834787

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

GTGCCTCAACTC

Flanking Amino Acid:

EMLTGRMLFAGGHELEQMQL

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

55.4

0.13

1.2

59.5

Major PPT

68.9

0.43

65.5

36.1

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

38.2

-0.9

1.9

44.54

37.9

Associated Gene:

Gene:

MAPK4

Ensembl Gene ID:

ENSAPLG00000004651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004780

5829849 - 5840896

11048