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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5834933_5835620_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5834933 - 5835620

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGCC

5'SS Class:

major

3'SS Sequence:

TCTGCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

CAATCCGTAACA

Flanking Amino Acid:

RIVDQHYSHKGYLSEGLVTK

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

68.2

38.6

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

0.72

0.8

73.1

37.3

Minor 5ss

36.2

-1.6

3.5

50.4

46.4

Minor BPS

59.7

0.3

2.1

69.4

42.7

Associated Gene:

Gene:

MAPK4

Ensembl Gene ID:

ENSAPLG00000004651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004780

5829849 - 5840896

11048