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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5845734_5846525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5845734 - 5846525

Intron Length:

792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

TTTTTTTTTGCT

Flanking Amino Acid:

FLGEETKDTKGEFFVVEADI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

81.2

0.7

0.9

72.5

42.4

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

45.7

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004879

5845585 - 5846691

1107