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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5855839_5858957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5855839 - 5858957

Intron Length:

3119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

TCTTTCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TCTTTCTAAACA

Flanking Amino Acid:

VLLLLSLAFWVKSDVQGTMR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

59.7

46.7

Major BPS

0.5

1.1

76.9

32.8

Major PPT

76.9

0.61

0.9

73.9

34.5

Minor 5ss

32.9

-2

2.8

31.4

42.5

Minor BPS

0.62

1.6

78.35

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005140

5854172 - 5859020

4849