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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5870848_5871024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5870848 - 5871024

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTACA

Flanking Amino Acid:

DTRQLQIEEKMQRNAKEQEE

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.1

35.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

98.8

1.1

0.5

95.2

16.3

Minor 5ss

35.6

-1.6

3.3

45.6

43.6

Minor BPS

71.2

0.66

1.5

82.45

31.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005482

5863723 - 5872649

8927