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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5879140_5882713_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5879140 - 5882713

Intron Length:

3574

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGA|GCGTGGATT

5'SS Class:

weak_major

3'SS Sequence:

CGCAGTACACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

TTTTCTTTCTTT

Flanking Amino Acid:

SEKIPETSVGEVWIPDPDEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.3

64.4

40.2

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

54.2

0.1

44.3

41.1

Minor 5ss

29.8

-2.3

4.2

44.1

44.8

Minor BPS

46.2

-0.2

3.6

83.14

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005678

5879099 - 5941475

62377