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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5882817_5885080_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5882817 - 5885080

Intron Length:

2264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGCTTT

5'SS Class:

weak_major

3'SS Sequence:

CGTGTCTCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GTGTTCTCACAT

Flanking Amino Acid:

SLQLKLEDETLYEYPIDLQG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

72.1

40.1

Major BPS

0.87

0.8

85.6

Major PPT

77.3

0.62

0.9

73.5

37.1

Minor 5ss

59.5

0.32

2.7

83.5

34.9

Minor BPS

47.5

-0.1

1.9

65.82

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000030573

5880697 - 5941475

60779

ENSAPLT00000005678

5879099 - 5941475

62377