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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5886990_5889554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5886990 - 5889554

Intron Length:

2565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

GATTTATGAAAG

Flanking Amino Acid:

VAEEAYKQMARDEKNQSIIV

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

75.5

0.63

40.9

Major PPT

0.47

0.9

64.3

36.7

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

46.6

-0.3

1.8

53.06

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000030573

5880697 - 5941475

60779

ENSAPLT00000005678

5879099 - 5941475

62377