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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_58903195_58905772_F

Intron Information:

Intron Rank:

141217

Intron Class:

major

Intron Phase:

Intron Coordinates:

58903195 - 58905772

Intron Length:

2578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

ATTGTGTTACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

77.7

0.62

0.9

73.8

35.4

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

-0.5

2.3

57.92

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037241

58902469 - 58906223

3755

ENSAPLT00000027207

58902469 - 58905936

3468

ENSAPLT00000021393

58902469 - 58918375

15907