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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_58906112_58911448_F

Intron Information:

Intron Rank:

141218

Intron Class:

major

Intron Phase:

Intron Coordinates:

58906112 - 58911448

Intron Length:

5337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GATTCCCTAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

86.4

0.82

0.8

81.4

35.2

Minor 5ss

34.9

-1.7

3.3

47.4

Minor BPS

66.5

0.38

1.8

70.79

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021393

58902469 - 58918375

15907