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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5890961_5892195_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5890961 - 5892195

Intron Length:

1235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

GCCTGTGCTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTCTTTTAGCC

Flanking Amino Acid:

SLPEFKDLGLNFFYTSQGGS

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

100

1.24

0.5

100

Major PPT

56.9

0.16

1.1

55.5

39.3

Minor 5ss

38.4

-1.3

41.2

Minor BPS

0.23

1.5

66.92

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048